Projects
Learn more about the 15 doctoral projects that are part of the DANIO Re-CODE network. The projects are organized into 4 work packages.
WP 1: Functional annotation of the regulatory landscape in three regeneration models
- Identification and epigenomic characterization of CREs driving early eye development in vivo and in vitro
- Identification of cis-regulatory elements that support optimal eye organoid morphogenesis
- Deciphering molecular mechanisms underlying successful brain regeneration in zebrafish
- Characterization of cis-regulatory networks in cardiac muscle de- and re-differentiation in heart regeneration
- Annotation, characterisation, and dynamics of cis-regulatory elements (CREs) in telencephalon injury
- Annotation, characterisation, and conservation of chromatin topology in telencephalon injury
WP 2: Comparative regenerative genomics
- Promoter architecture and usage during zebrafish, axolotl, and mouse regenerative neurogenesis
- Identifying the gene regulatory code for regeneration
- Characterising the regenerative potential of the neurogenic niche in the vertebrate subependymal zone
- Comparative epigenomics of vertebrate regeneration